pezmaster31/bamtools

C++ API & command-line toolkit for working with BAM data

C++

432

457 commits

updated May 18, 2025

See the code

README

--------------------------------------------------------------------------------
README : BAMTOOLS
--------------------------------------------------------------------------------

BamTools provides both a programmer's API and an end-user's toolkit for handling
BAM files.

I.   Learn More

II.  License

III. Acknowledgements

IV.  Contact

--------------------------------------------------------------------------------
I. Learn More:
--------------------------------------------------------------------------------

Installation steps, tutorial, API documentation, etc. are all now available 
through the BamTools project wiki:

https://github.com/pezmaster31/bamtools/wiki

Join the mailing list(s) to stay informed of updates or get involved with 
contributing:

https://github.com/pezmaster31/bamtools/wiki/Mailing-lists

--------------------------------------------------------------------------------
II. License :
--------------------------------------------------------------------------------

Both the BamTools API and toolkit are released under the MIT License.
Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth,
    Michael Stromberg

See included file LICENSE for details.

--------------------------------------------------------------------------------
III. Acknowledgements :
--------------------------------------------------------------------------------

 * Aaron Quinlan for several key feature ideas and bug fix contributions
 * Baptiste Lepilleur for the public-domain JSON parser (JsonCPP)
 * Heng Li, author of SAMtools - the original C-language BAM API/toolkit.

--------------------------------------------------------------------------------
IV. Contact :
--------------------------------------------------------------------------------

Feel free to contact me with any questions, comments, suggestions, bug reports,
    etc.

Derek Barnett
Marth Lab
Biology Dept., Boston College

Email: derekwbarnett@gmail.com
Project Website: http://github.com/pezmaster31/bamtools

Not written in Markdown, so it's shown here as plain text — view it formatted on GitHub.

Significant stargazers

Alexander Regueiro

69 followers · starred May 2023

Isaac Turner

116 followers · starred Sep 2013

pezmaster31/bamtools

C++ API & command-line toolkit for working with BAM data

C++

432

457 commits

updated May 18, 2025

See the code

README

--------------------------------------------------------------------------------
README : BAMTOOLS
--------------------------------------------------------------------------------

BamTools provides both a programmer's API and an end-user's toolkit for handling
BAM files.

I.   Learn More

II.  License

III. Acknowledgements

IV.  Contact

--------------------------------------------------------------------------------
I. Learn More:
--------------------------------------------------------------------------------

Installation steps, tutorial, API documentation, etc. are all now available 
through the BamTools project wiki:

https://github.com/pezmaster31/bamtools/wiki

Join the mailing list(s) to stay informed of updates or get involved with 
contributing:

https://github.com/pezmaster31/bamtools/wiki/Mailing-lists

--------------------------------------------------------------------------------
II. License :
--------------------------------------------------------------------------------

Both the BamTools API and toolkit are released under the MIT License.
Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth,
    Michael Stromberg

See included file LICENSE for details.

--------------------------------------------------------------------------------
III. Acknowledgements :
--------------------------------------------------------------------------------

 * Aaron Quinlan for several key feature ideas and bug fix contributions
 * Baptiste Lepilleur for the public-domain JSON parser (JsonCPP)
 * Heng Li, author of SAMtools - the original C-language BAM API/toolkit.

--------------------------------------------------------------------------------
IV. Contact :
--------------------------------------------------------------------------------

Feel free to contact me with any questions, comments, suggestions, bug reports,
    etc.

Derek Barnett
Marth Lab
Biology Dept., Boston College

Email: derekwbarnett@gmail.com
Project Website: http://github.com/pezmaster31/bamtools

Not written in Markdown, so it's shown here as plain text — view it formatted on GitHub.

Significant stargazers

Alexander Regueiro

69 followers · starred May 2023

Isaac Turner

116 followers · starred Sep 2013

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