README
News
| Papers | |
|---|---|
| Toward Expanding the Scope of Radiology Report Summarization to Multiple Anatomies and Modalities | Dataset |
| Overview of the RadSum23 Shared Task on Multi-modal and Multi-anatomical Radiology Report Summarization | Challenge |
| Improving the Factual Correctness of Radiology Report Generation with Semantic Rewards | Replicate |
ViLMedic: a framework for research at the intersection of vision and language in medical AI
ViLMedic has a dedicated website at: https://vilmedic.app/
@inproceedings{delbrouck-etal-2022-vilmedic,
title = "{V}i{LM}edic: a framework for research at the intersection of vision and language in medical {AI}",
author = "Delbrouck, Jean-benoit and
Saab, Khaled and
Varma, Maya and
Eyuboglu, Sabri and
Chambon, Pierre and
Dunnmon, Jared and
Zambrano, Juan and
Chaudhari, Akshay and
Langlotz, Curtis",
booktitle = "Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics: System Demonstrations",
month = may,
year = "2022",
address = "Dublin, Ireland",
publisher = "Association for Computational Linguistics",
url = "https://aclanthology.org/2022.acl-demo.3",
pages = "23--34",
}
Quickstart and documentation
Rendez-vous at: https://vilmedic.app/installation/
Implemented solutions
ViLMedic replicates solutions from the multimodal medical literature.
Blocks
| Blocks |
|---|
| Natural Language Processing |
| HuggingFace transformer encoder and decoder |
| HuggingFace transformer beam-search and model ensembling :fire: |
| NLG metrics (BLEU, ROUGE, METEOR, MAUVE) and Radiology Reports Generation metrics (F1-CheXbert) |
| RadGraph |
| Vision |
| All PyTorch VisualEncoder architectures |
| Vision Transformer |
| TorchXRayVision |
| Losses |
| All PyTorch losses |
| ConVirt loss |
| GLoRIA loss |
| InfoNCE loss |
| SuperLoss |
| Reinforcement Learning |
| Self-critical Sequence Training (HuggingFace compliant) :fire: |
| PPO optimization (HuggingFace compliant) |
Citation
If you use ViLMedic in your work or use any models published in ViLMedic, please cite:
@inproceedings{delbrouck-etal-2022-vilmedic,
title = "{V}i{LM}edic: a framework for research at the intersection of vision and language in medical {AI}",
author = "Delbrouck, Jean-benoit and
Saab, Khaled and
Varma, Maya and
Eyuboglu, Sabri and
Chambon, Pierre and
Dunnmon, Jared and
Zambrano, Juan and
Chaudhari, Akshay and
Langlotz, Curtis",
booktitle = "Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics: System Demonstrations",
month = may,
year = "2022",
address = "Dublin, Ireland",
publisher = "Association for Computational Linguistics",
url = "https://aclanthology.org/2022.acl-demo.3",
pages = "23--34",
}
License
ViLMedic is MIT-licensed. The license applies to the pre-trained models as well.
Contributors
Similar repos
Languages
Python
77.2%
Jupyter Notebook
19.3%
Shell
3.4%
README
News
| Papers | |
|---|---|
| Toward Expanding the Scope of Radiology Report Summarization to Multiple Anatomies and Modalities | Dataset |
| Overview of the RadSum23 Shared Task on Multi-modal and Multi-anatomical Radiology Report Summarization | Challenge |
| Improving the Factual Correctness of Radiology Report Generation with Semantic Rewards | Replicate |
ViLMedic: a framework for research at the intersection of vision and language in medical AI
ViLMedic has a dedicated website at: https://vilmedic.app/
@inproceedings{delbrouck-etal-2022-vilmedic,
title = "{V}i{LM}edic: a framework for research at the intersection of vision and language in medical {AI}",
author = "Delbrouck, Jean-benoit and
Saab, Khaled and
Varma, Maya and
Eyuboglu, Sabri and
Chambon, Pierre and
Dunnmon, Jared and
Zambrano, Juan and
Chaudhari, Akshay and
Langlotz, Curtis",
booktitle = "Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics: System Demonstrations",
month = may,
year = "2022",
address = "Dublin, Ireland",
publisher = "Association for Computational Linguistics",
url = "https://aclanthology.org/2022.acl-demo.3",
pages = "23--34",
}
Quickstart and documentation
Rendez-vous at: https://vilmedic.app/installation/
Implemented solutions
ViLMedic replicates solutions from the multimodal medical literature.
Blocks
| Blocks |
|---|
| Natural Language Processing |
| HuggingFace transformer encoder and decoder |
| HuggingFace transformer beam-search and model ensembling :fire: |
| NLG metrics (BLEU, ROUGE, METEOR, MAUVE) and Radiology Reports Generation metrics (F1-CheXbert) |
| RadGraph |
| Vision |
| All PyTorch VisualEncoder architectures |
| Vision Transformer |
| TorchXRayVision |
| Losses |
| All PyTorch losses |
| ConVirt loss |
| GLoRIA loss |
| InfoNCE loss |
| SuperLoss |
| Reinforcement Learning |
| Self-critical Sequence Training (HuggingFace compliant) :fire: |
| PPO optimization (HuggingFace compliant) |
Citation
If you use ViLMedic in your work or use any models published in ViLMedic, please cite:
@inproceedings{delbrouck-etal-2022-vilmedic,
title = "{V}i{LM}edic: a framework for research at the intersection of vision and language in medical {AI}",
author = "Delbrouck, Jean-benoit and
Saab, Khaled and
Varma, Maya and
Eyuboglu, Sabri and
Chambon, Pierre and
Dunnmon, Jared and
Zambrano, Juan and
Chaudhari, Akshay and
Langlotz, Curtis",
booktitle = "Proceedings of the 60th Annual Meeting of the Association for Computational Linguistics: System Demonstrations",
month = may,
year = "2022",
address = "Dublin, Ireland",
publisher = "Association for Computational Linguistics",
url = "https://aclanthology.org/2022.acl-demo.3",
pages = "23--34",
}
License
ViLMedic is MIT-licensed. The license applies to the pre-trained models as well.
Similar repos
Contributors
Languages
Python
77.2%
Jupyter Notebook
19.3%
Shell
3.4%