andregraubner/ori-nt

Predict bacterial origins of replication with deep learning

Python

20 commits

updated Jan 28, 2025

README

Predict plasmid Origins of Replication (ORIs) with a fine-tuned DNA sequence model.

Imports and file paths are currently broken. This will be fixed after the current ICML deadline.

tsoiegor/CRE-finder

DNA transformer based model, finetuned to predict cis regulatory elements' presence in a provided…

vladimirkovacevic/nucl-protein

Multimodal LLM-based model for processing protein and nucleotide sequences

Benedikt-K/Master_Project

training a transformer to predict the orientation given by CRISPR-evOr

RahimKab/gmo_detection_nt

kevalpipalia/genome-foundation-models-project

Leveraging genome foundation models to predict personal gene expression from DNA sequence

pratik-r/dlfse

saffron-j-kendrick/bionlp1

TerminatorJ/BERTLocRNA

Using Large language model to predict localization